Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRGV4A0A0C4DH28 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 AC131274.2-201ENST00000580697 1507 ntBASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 AF131216.4-201ENST00000638924 1588 ntBASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV4A0A0C4DH28 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 BX664725.1-201ENST00000438252 379 ntBASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRGV4A0A0C4DH28 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV4A0A0C4DH28 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 ALDH1A3-203ENST00000557963 1670 ntBASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.17■□□□□ 0.18
TRGV4A0A0C4DH28 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV4A0A0C4DH28 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV4A0A0C4DH28 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms