Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 AC004448.1-201ENST00000458332 883 ntBASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 AC103724.3-201ENST00000564481 992 ntBASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 DUSP8P3-201ENST00000399571 1760 ntBASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 YBX1P4-201ENST00000392794 808 ntBASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV24A0A0B4J272 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV24A0A0B4J272 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV24A0A0B4J272 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV24A0A0B4J272 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV24A0A0B4J272 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV24A0A0B4J272 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV24A0A0B4J272 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV24A0A0B4J272 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV24A0A0B4J272 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV24A0A0B4J272 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV24A0A0B4J272 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV24A0A0B4J272 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV24A0A0B4J272 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV24A0A0B4J272 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV24A0A0B4J272 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV24A0A0B4J272 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 AL031848.2-201ENST00000607670 837 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms