Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV38-1A0A0B4J264 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAV38-1A0A0B4J264 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV38-1A0A0B4J264 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV38-1A0A0B4J264 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV38-1A0A0B4J264 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV38-1A0A0B4J264 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV38-1A0A0B4J264 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRAV38-1A0A0B4J264 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV38-1A0A0B4J264 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV38-1A0A0B4J264 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRAV38-1A0A0B4J264 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV38-1A0A0B4J264 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 AL356740.2-201ENST00000601559 647 ntBASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV38-1A0A0B4J264 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 AC004812.2-201ENST00000611079 2094 ntBASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV38-1A0A0B4J264 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV38-1A0A0B4J264 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 AC131212.1-201ENST00000613771 668 ntBASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV38-1A0A0B4J264 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 AL117332.1-201ENST00000622628 974 ntBASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV38-1A0A0B4J264 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 MIR3621-201ENST00000580529 85 ntBASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRAV38-1A0A0B4J264 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV38-1A0A0B4J264 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.02■□□□□ 0.63
TRAV38-1A0A0B4J264 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRAV38-1A0A0B4J264 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV38-1A0A0B4J264 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV38-1A0A0B4J264 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV38-1A0A0B4J264 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV38-1A0A0B4J264 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms