Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 AC232323.1-201ENST00000540724 2099 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 MIR4326-201ENST00000582203 59 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 U62317.4-201ENST00000609758 448 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AL139158.3-201ENST00000641212 1562 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 ACTBP1-201ENST00000417985 1113 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AL512310.5-201ENST00000551999 515 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 RN7SL624P-201ENST00000580297 278 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 AC090950.1-202ENST00000605733 644 ntBASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RIMBP3Q9UFD9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 KRT8P42-201ENST00000405771 1399 ntBASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RIMBP3Q9UFD9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 AC010395.2-201ENST00000509899 904 ntBASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RIMBP3Q9UFD9 NLK-203ENST00000582037 1503 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 KRT8P24-201ENST00000560290 1559 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 SLC25A5P6-201ENST00000515328 886 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 HNRNPA1P69-201ENST00000552536 933 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 Z69706.1-201ENST00000595428 547 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 AZU1P1-201ENST00000603479 385 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 AC020763.2-201ENST00000623155 1255 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 AC011239.2-201ENST00000624820 1489 ntBASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIMBP3Q9UFD9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 PFN1P10-201ENST00000455962 327 ntBASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms