Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 CEP164P1-201ENST00000455142 418 ntBASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AL109837.1-201ENST00000603272 613 ntBASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 MIR6074-201ENST00000612054 107 ntBASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 AC215219.1-201ENST00000400706 1817 ntBASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLCF1Q9UBD9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AL161932.2-201ENST00000435436 679 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 MAGEA5-201ENST00000446757 942 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 TPT1P11-201ENST00000458482 498 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AC021016.3-201ENST00000608367 477 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 MIR6769A-201ENST00000617340 73 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AL591471.1-201ENST00000621855 229 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms