Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 AL157813.1-201ENST00000612996 587 ntBASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAT1LQ9HCJ6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC067750.1-201ENST00000608826 6545 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC068418.2-201ENST00000577309 3703 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 KRT8P21-201ENST00000430398 1491 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 XBP1P1-201ENST00000436573 652 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 ST13P19-201ENST00000442505 1124 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 TPT1P11-201ENST00000458482 498 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 PGAM1P5-201ENST00000548011 764 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC124068.2-201ENST00000569473 1109 ntBASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAT1LQ9HCJ6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC012617.1-204ENST00000586340 2305 ntBASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC090857.1-201ENST00000527400 390 ntBASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC005586.2-201ENST00000563946 837 ntBASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 AC097724.1-201ENST00000609581 426 ntBASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 ST20-AS1-201ENST00000560255 4223 ntBASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAT1LQ9HCJ6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms