Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AC099521.3-201ENST00000624251 2938 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AC079178.1-201ENST00000420915 656 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AC104306.2-201ENST00000451877 341 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MESTP3-201ENST00000503460 968 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 C2orf69P2-201ENST00000562032 1123 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 AC005562.1-201ENST00000583030 3219 ntBASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCGF1Q9BSM1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AC099548.2-209ENST00000480264 625 ntBASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AC104982.3-201ENST00000581995 514 ntBASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms