Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.45■□□□□ 0.38
EYA3Q99504 GNG10P1-201ENST00000452289 199 ntBASIC17.45■□□□□ 0.38
EYA3Q99504 RN7SL396P-201ENST00000471086 295 ntBASIC17.45■□□□□ 0.38
EYA3Q99504 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.45■□□□□ 0.38
EYA3Q99504 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.45■□□□□ 0.38
EYA3Q99504 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.45■□□□□ 0.38
EYA3Q99504 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.45■□□□□ 0.38
EYA3Q99504 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.45■□□□□ 0.38
EYA3Q99504 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EYA3Q99504 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EYA3Q99504 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EYA3Q99504 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.44■□□□□ 0.38
EYA3Q99504 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 AC144831.1-201ENST00000573312 2656 ntBASIC17.44■□□□□ 0.38
EYA3Q99504 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 ACTG1P19-201ENST00000418987 1116 ntBASIC17.44■□□□□ 0.38
EYA3Q99504 PPP1R2P4-201ENST00000424051 595 ntBASIC17.44■□□□□ 0.38
EYA3Q99504 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.44■□□□□ 0.38
EYA3Q99504 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EYA3Q99504 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.44■□□□□ 0.38
EYA3Q99504 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
EYA3Q99504 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EYA3Q99504 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A21P-201ENST00000510875 1396 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A15P-201ENST00000514465 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A6P-201ENST00000515148 1394 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A16P-201ENST00000526662 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A9P-201ENST00000527940 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A5P-201ENST00000528738 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A14P-201ENST00000530386 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 FAM90A13P-201ENST00000534703 1395 ntBASIC17.43■□□□□ 0.38
EYA3Q99504 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EYA3Q99504 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EYA3Q99504 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EYA3Q99504 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms