Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.78□□□□□ -0.04
PHOX2BQ99453 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.78□□□□□ -0.04
PHOX2BQ99453 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PHOX2BQ99453 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHOX2BQ99453 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PHOX2BQ99453 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PHOX2BQ99453 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.77□□□□□ -0.04
PHOX2BQ99453 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.77□□□□□ -0.04
PHOX2BQ99453 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PHOX2BQ99453 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PHOX2BQ99453 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.77□□□□□ -0.04
PHOX2BQ99453 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PHOX2BQ99453 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 TSPY25P-201ENST00000429463 745 ntBASIC14.77□□□□□ -0.05
PHOX2BQ99453 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 NPM1P28-201ENST00000492269 840 ntBASIC14.77□□□□□ -0.05
PHOX2BQ99453 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AL590235.1-201ENST00000564650 861 ntBASIC14.77□□□□□ -0.05
PHOX2BQ99453 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AL161772.1-201ENST00000610494 4412 ntBASIC14.77□□□□□ -0.05
PHOX2BQ99453 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 AC026748.1-201ENST00000624349 3251 ntBASIC14.77□□□□□ -0.05
PHOX2BQ99453 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHOX2BQ99453 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.77□□□□□ -0.05
PHOX2BQ99453 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AL359258.3-201ENST00000622910 2331 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AC023908.3-201ENST00000564211 3047 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AC106827.1-201ENST00000366454 431 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PHOX2BQ99453 ACTG1P19-201ENST00000418987 1116 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 OR51A9P-201ENST00000422578 911 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 ELOCP6-201ENST00000429066 328 ntBASIC14.76□□□□□ -0.05
PHOX2BQ99453 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHOX2BQ99453 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms