Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 KHSRPP1-201ENST00000427983 1768 ntBASIC14.54□□□□□ -0.08
HMGB4Q8WW32 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGB4Q8WW32 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AL354861.1-201ENST00000445213 355 ntBASIC14.53□□□□□ -0.08
HMGB4Q8WW32 RN7SL470P-201ENST00000583069 259 ntBASIC14.53□□□□□ -0.08
HMGB4Q8WW32 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AL591471.1-201ENST00000621855 229 ntBASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AL132780.4-201ENST00000624870 1135 ntBASIC14.53□□□□□ -0.08
HMGB4Q8WW32 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGB4Q8WW32 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGB4Q8WW32 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 HLA-DMA-203ENST00000395305 777 ntBASIC14.52□□□□□ -0.09
HMGB4Q8WW32 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AC004837.1-201ENST00000446267 564 ntBASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 ALG1L13P-202ENST00000519320 584 ntBASIC14.52□□□□□ -0.09
HMGB4Q8WW32 TMCO5B-205ENST00000530020 894 ntBASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 CR383656.3-201ENST00000551315 183 ntBASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGB4Q8WW32 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms