Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 CD8B2-202ENST00000417670 633 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 CNN2P8-201ENST00000421872 913 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 FAM197Y7-201ENST00000432892 766 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AC244669.2-201ENST00000612320 853 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 AC136759.1-202ENST00000530858 2194 ntBASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF439Q8NDP4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 RN7SL832P-201ENST00000607781 1756 ntBASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 AC215219.1-201ENST00000400706 1817 ntBASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF439Q8NDP4 AC004945.1-201ENST00000416738 983 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms