Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 FAU-201ENST00000279259 461 ntTSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 OR7E155P-201ENST00000412208 1014 ntBASIC19.38■□□□□ 0.69
XRN1Q8IZH2 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.38■□□□□ 0.69
XRN1Q8IZH2 CD37-203ENST00000426897 1204 ntTSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 RPL29P2-201ENST00000488409 460 ntBASIC19.38■□□□□ 0.69
XRN1Q8IZH2 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 AC073347.1-201ENST00000421633 2643 ntBASIC19.38■□□□□ 0.69
XRN1Q8IZH2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRN1Q8IZH2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC008620.2-201ENST00000510294 1569 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC041040.1-201ENST00000425197 460 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 MIR5091-201ENST00000578707 93 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 RN7SL134P-201ENST00000579756 303 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC132812.1-201ENST00000583145 892 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC006986.1-201ENST00000612764 241 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AC009041.4-201ENST00000620075 638 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 MEP1AP1-201ENST00000636082 1097 ntBASIC19.37■□□□□ 0.69
XRN1Q8IZH2 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC19.37■□□□□ 0.69
XRN1Q8IZH2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 KRT18P44-201ENST00000416086 1285 ntBASIC19.36■□□□□ 0.69
XRN1Q8IZH2 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 OR4A49P-201ENST00000527050 632 ntBASIC19.36■□□□□ 0.69
XRN1Q8IZH2 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 AL139424.3-202ENST00000641619 917 ntBASIC19.36■□□□□ 0.69
XRN1Q8IZH2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 MTHFR-210ENST00000641407 2387 ntBASIC19.36■□□□□ 0.69
XRN1Q8IZH2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
XRN1Q8IZH2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms