Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC022616.1-201ENST00000518688 554 ntBASIC12.94□□□□□ -0.34
RTTNQ86VV8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC138627.1-207ENST00000641560 1006 ntBASIC12.94□□□□□ -0.34
RTTNQ86VV8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AP000593.2-201ENST00000542775 1433 ntBASIC12.94□□□□□ -0.34
RTTNQ86VV8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 YBX1P6-201ENST00000442962 1002 ntBASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.94□□□□□ -0.34
RTTNQ86VV8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTTNQ86VV8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 FAM86HP-204ENST00000513466 959 ntBASIC12.93□□□□□ -0.34
RTTNQ86VV8 SCARNA20.5-201ENST00000516991 142 ntBASIC12.93□□□□□ -0.34
RTTNQ86VV8 AC027237.1-201ENST00000560942 655 ntBASIC12.93□□□□□ -0.34
RTTNQ86VV8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.93□□□□□ -0.34
RTTNQ86VV8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.93□□□□□ -0.34
RTTNQ86VV8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTTNQ86VV8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms