Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AL607033.1-201ENST00000623900 1599 ntBASIC12.81□□□□□ -0.36
C11orf88Q6PI97 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 MIR661-201ENST00000384842 89 ntBASIC12.81□□□□□ -0.36
C11orf88Q6PI97 MEP1AP4-201ENST00000423244 1087 ntBASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 SPTLC1P1-201ENST00000447199 261 ntBASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AC022447.6-201ENST00000515522 438 ntBASIC12.81□□□□□ -0.36
C11orf88Q6PI97 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf88Q6PI97 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CU639417.3-201ENST00000624240 1404 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AC098614.1-201ENST00000368528 745 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 SPDYE17-201ENST00000412399 783 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AC025048.6-201ENST00000634326 1161 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AL645728.2-202ENST00000641679 227 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms