Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AC112176.1-201ENST00000565428 3024 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 CRB3P1-201ENST00000449338 276 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 TP53TG3HP-202ENST00000569755 579 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 MIR3197-201ENST00000582241 73 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AC138761.1-201ENST00000584393 385 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AL662799.1-202ENST00000614205 422 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 MIR8072-201ENST00000614241 80 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 AC012508.2-201ENST00000567613 1472 ntBASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 AC073548.1-201ENST00000624088 1882 ntBASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM53Q6P2H8 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 NUS1P3-201ENST00000423502 862 ntBASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms