Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 FAM197Y8-203ENST00000450145 560 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 KRT18P43-201ENST00000469825 1281 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC004066.1-201ENST00000502488 802 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AP000842.3-202ENST00000569238 1080 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 AP002472.1-201ENST00000577490 586 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AL121723.1-201ENST00000445194 1519 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL54Q6P161 AC134407.3-201ENST00000624035 2139 ntBASIC11.02□□□□□ -0.65
MRPL54Q6P161 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 AC024075.2-201ENST00000598112 1473 ntBASIC11.01□□□□□ -0.65
MRPL54Q6P161 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 AC136604.1-202ENST00000425471 771 ntBASIC11.01□□□□□ -0.65
MRPL54Q6P161 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 AC098831.1-202ENST00000438821 336 ntBASIC11.01□□□□□ -0.65
MRPL54Q6P161 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL54Q6P161 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL54Q6P161 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms