Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 PUDPP3-201ENST00000445368 636 ntBASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 FTLP1-201ENST00000449155 526 ntBASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 AL353726.2-201ENST00000623259 884 ntBASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC144BQ3MJ40 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 RN7SKP230-201ENST00000365642 335 ntBASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AL596276.2-201ENST00000447525 331 ntBASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AL160314.3-201ENST00000556041 767 ntBASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PRKXP1-201ENST00000561423 1122 ntBASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 MIR6727-201ENST00000620702 65 ntBASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC144BQ3MJ40 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms