Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AC105206.1-202ENST00000314927 2368 ntBASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 AC018735.1-201ENST00000437208 1502 ntBASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RSPO1Q2MKA7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AC104073.2-201ENST00000453737 312 ntBASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AC008805.1-201ENST00000590892 364 ntBASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AL023803.2-201ENST00000620080 638 ntBASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms