Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AC016694.1-201ENST00000434179 700 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 FAM8A4P-201ENST00000435433 1213 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 TTTY23B-201ENST00000442790 549 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 BCRP2-202ENST00000447763 634 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 ALG3P1-201ENST00000508806 1114 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 BCRP6-201ENST00000510112 632 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 BCRP7-201ENST00000511549 544 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 RNA5SP486-201ENST00000515961 83 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AC233724.13-201ENST00000598383 410 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 BX088702.1-201ENST00000610784 235 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 AC136759.1-202ENST00000530858 2194 ntBASIC9.68□□□□□ -0.86
SYCNQ0VAF6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCNQ0VAF6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 F10-203ENST00000409306 1450 ntTSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AL512384.1-201ENST00000406683 331 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 RN7SKP175-201ENST00000408472 289 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 KRT43P-201ENST00000434019 910 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PUDPP3-201ENST00000445368 636 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AL391280.1-201ENST00000506969 1062 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 APRT-204ENST00000563655 709 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 OR10B1P-201ENST00000601666 907 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 ECM1P1-201ENST00000604092 1279 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms