Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 AL391647.1-201ENST00000395664 511 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.13□□□□□ -0.31
CDK5Q00535 AC068587.3-201ENST00000526613 355 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CDK5Q00535 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CDK5Q00535 AC009486.1-201ENST00000569860 813 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 CHCHD2P3-201ENST00000603038 451 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 AC083964.2-201ENST00000623988 2396 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 AC005562.1-201ENST00000583030 3219 ntBASIC13.13□□□□□ -0.31
CDK5Q00535 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDK5Q00535 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.13□□□□□ -0.31
CDK5Q00535 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.13□□□□□ -0.31
CDK5Q00535 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDK5Q00535 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.12□□□□□ -0.31
CDK5Q00535 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.12□□□□□ -0.31
CDK5Q00535 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.12□□□□□ -0.31
CDK5Q00535 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 CU634019.7-201ENST00000624153 1185 ntBASIC13.12□□□□□ -0.31
CDK5Q00535 FP236241.2-201ENST00000624906 1185 ntBASIC13.12□□□□□ -0.31
CDK5Q00535 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDK5Q00535 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDK5Q00535 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 AL365181.3-201ENST00000605886 3222 ntBASIC13.12□□□□□ -0.31
CDK5Q00535 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 AC087386.2-201ENST00000623212 4637 ntBASIC13.12□□□□□ -0.31
CDK5Q00535 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.12□□□□□ -0.31
CDK5Q00535 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDK5Q00535 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDK5Q00535 AL138709.1-201ENST00000614840 1693 ntBASIC13.12□□□□□ -0.31
CDK5Q00535 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms