Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC009093.10-201ENST00000641956 1442 ntBASIC14.35□□□□□ -0.11
CDKL1Q00532 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKL1Q00532 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKL1Q00532 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 COX20P2-201ENST00000452636 358 ntBASIC14.35□□□□□ -0.11
CDKL1Q00532 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKL1Q00532 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.35□□□□□ -0.11
CDKL1Q00532 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDKL1Q00532 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDKL1Q00532 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 KRT8P28-201ENST00000433288 1390 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AC015909.5-201ENST00000624336 2266 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 BOLA2P3-201ENST00000404566 256 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 AL035633.1-201ENST00000406139 838 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AL355994.2-201ENST00000447882 704 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AC027237.1-201ENST00000560942 655 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKL1Q00532 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 TCAM1P-207ENST00000485295 1537 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms