Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ACTBP60709 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACTBP60709 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.58□□□□□ -0.4
ACTBP60709 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
ACTBP60709 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ACTBP60709 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.57□□□□□ -0.4
ACTBP60709 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.57□□□□□ -0.4
ACTBP60709 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
ACTBP60709 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.57□□□□□ -0.4
ACTBP60709 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 AC009477.1-201ENST00000452936 217 ntBASIC12.57□□□□□ -0.4
ACTBP60709 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.57□□□□□ -0.4
ACTBP60709 CYMP-203ENST00000474680 1263 ntBASIC12.57□□□□□ -0.4
ACTBP60709 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.57□□□□□ -0.4
ACTBP60709 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 AL390955.2-201ENST00000603032 514 ntBASIC12.57□□□□□ -0.4
ACTBP60709 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.57□□□□□ -0.4
ACTBP60709 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 AC015688.4-201ENST00000580780 1647 ntBASIC12.57□□□□□ -0.4
ACTBP60709 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 BTBD7P1-201ENST00000447253 1453 ntBASIC12.57□□□□□ -0.4
ACTBP60709 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ACTBP60709 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ACTBP60709 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ACTBP60709 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.56□□□□□ -0.4
ACTBP60709 NCLP1-201ENST00000445357 1963 ntBASIC12.56□□□□□ -0.4
ACTBP60709 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 AC019294.4-201ENST00000561777 2905 ntBASIC12.56□□□□□ -0.4
ACTBP60709 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
ACTBP60709 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 BEND3P3-201ENST00000611030 2440 ntBASIC12.56□□□□□ -0.4
ACTBP60709 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.56□□□□□ -0.4
ACTBP60709 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 AC004890.2-204ENST00000481968 304 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms