Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.04□□□□□ -0.32
CLRN1P58418 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 CICP12-201ENST00000455801 843 ntBASIC13.04□□□□□ -0.32
CLRN1P58418 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.04□□□□□ -0.32
CLRN1P58418 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 AC027237.1-201ENST00000560942 655 ntBASIC13.04□□□□□ -0.32
CLRN1P58418 AP006547.1-201ENST00000563435 692 ntBASIC13.04□□□□□ -0.32
CLRN1P58418 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.04□□□□□ -0.32
CLRN1P58418 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.04□□□□□ -0.32
CLRN1P58418 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 KRT8P28-201ENST00000433288 1390 ntBASIC13.04□□□□□ -0.32
CLRN1P58418 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.04□□□□□ -0.32
CLRN1P58418 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLRN1P58418 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLRN1P58418 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.03□□□□□ -0.32
CLRN1P58418 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 STRCP1-201ENST00000509801 5328 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.03□□□□□ -0.32
CLRN1P58418 CNN2P10-201ENST00000443067 918 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.03□□□□□ -0.32
CLRN1P58418 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 AC104989.1-201ENST00000519711 778 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.03□□□□□ -0.32
CLRN1P58418 AL512343.1-201ENST00000605837 169 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 AL035252.4-201ENST00000624174 288 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.03□□□□□ -0.32
CLRN1P58418 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLRN1P58418 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.03□□□□□ -0.32
CLRN1P58418 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLRN1P58418 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 SHC1P1-201ENST00000425230 1745 ntBASIC13.02□□□□□ -0.32
CLRN1P58418 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.02□□□□□ -0.32
CLRN1P58418 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CLRN1P58418 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLRN1P58418 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms