Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GTF2A1P52655 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.29□□□□□ -0.12
GTF2A1P52655 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GTF2A1P52655 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC14.29□□□□□ -0.12
GTF2A1P52655 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 AKR1C7P-201ENST00000305623 895 ntBASIC14.28□□□□□ -0.12
GTF2A1P52655 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 RPS2P1-201ENST00000434010 821 ntBASIC14.28□□□□□ -0.12
GTF2A1P52655 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AC093724.1-201ENST00000448659 1027 ntBASIC14.28□□□□□ -0.12
GTF2A1P52655 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 AL845472.1-202ENST00000624675 4080 ntBASIC14.28□□□□□ -0.12
GTF2A1P52655 FP325332.1-201ENST00000624818 2045 ntBASIC14.28□□□□□ -0.12
GTF2A1P52655 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GTF2A1P52655 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC14.28□□□□□ -0.12
GTF2A1P52655 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.28□□□□□ -0.12
GTF2A1P52655 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 REXO1L4P-201ENST00000605109 1937 ntBASIC14.27□□□□□ -0.12
GTF2A1P52655 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GTF2A1P52655 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GTF2A1P52655 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
GTF2A1P52655 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.27□□□□□ -0.13
GTF2A1P52655 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.27□□□□□ -0.13
GTF2A1P52655 AF238378.1-201ENST00000526806 358 ntBASIC14.27□□□□□ -0.13
GTF2A1P52655 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.27□□□□□ -0.13
GTF2A1P52655 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms