Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.3□□□□□ -0.28
SSR4P51571 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.3□□□□□ -0.28
SSR4P51571 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.3□□□□□ -0.28
SSR4P51571 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.3□□□□□ -0.28
SSR4P51571 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.3□□□□□ -0.28
SSR4P51571 RTN3P1-201ENST00000536295 711 ntBASIC13.3□□□□□ -0.28
SSR4P51571 RHOQP1-201ENST00000555758 579 ntBASIC13.3□□□□□ -0.28
SSR4P51571 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 MIR6769A-201ENST00000617340 73 ntBASIC13.3□□□□□ -0.28
SSR4P51571 LINC01165-201ENST00000445190 1623 ntBASIC13.3□□□□□ -0.28
SSR4P51571 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 AC064801.2-201ENST00000625052 1303 ntBASIC13.3□□□□□ -0.28
SSR4P51571 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSR4P51571 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSR4P51571 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.3□□□□□ -0.28
SSR4P51571 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.29□□□□□ -0.28
SSR4P51571 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.29□□□□□ -0.28
SSR4P51571 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 RN7SL530P-201ENST00000485097 298 ntBASIC13.29□□□□□ -0.28
SSR4P51571 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 AC008723.1-201ENST00000506922 207 ntBASIC13.29□□□□□ -0.28
SSR4P51571 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.29□□□□□ -0.28
SSR4P51571 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
SSR4P51571 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 AC012044.1-201ENST00000603431 297 ntBASIC13.29□□□□□ -0.28
SSR4P51571 LINC01783-202ENST00000614408 828 ntBASIC13.29□□□□□ -0.28
SSR4P51571 BX284668.2-205ENST00000619677 828 ntBASIC13.29□□□□□ -0.28
SSR4P51571 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.29□□□□□ -0.28
SSR4P51571 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SSR4P51571 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSR4P51571 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
SSR4P51571 AL390755.1-201ENST00000623716 2027 ntBASIC13.29□□□□□ -0.28
SSR4P51571 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSR4P51571 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR4P51571 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SSR4P51571 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR4P51571 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR4P51571 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR4P51571 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR4P51571 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR4P51571 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR4P51571 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.28□□□□□ -0.28
SSR4P51571 AC116345.2-201ENST00000512837 523 ntBASIC13.28□□□□□ -0.28
SSR4P51571 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms