Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.81■□□□□ 0.12
CASP4P49662 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 RPL18P13-201ENST00000478088 569 ntBASIC15.81■□□□□ 0.12
CASP4P49662 AC006122.1-201ENST00000493323 440 ntBASIC15.81■□□□□ 0.12
CASP4P49662 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CASP4P49662 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.81■□□□□ 0.12
CASP4P49662 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 AC009884.2-201ENST00000603110 324 ntBASIC15.81■□□□□ 0.12
CASP4P49662 AC091271.1-201ENST00000611877 1162 ntBASIC15.81■□□□□ 0.12
CASP4P49662 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.81■□□□□ 0.12
CASP4P49662 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP4P49662 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP4P49662 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP4P49662 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 OR2I1P-209ENST00000641730 5365 ntBASIC15.8■□□□□ 0.12
CASP4P49662 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.8■□□□□ 0.12
CASP4P49662 VDAC1P1-201ENST00000439229 848 ntBASIC15.8■□□□□ 0.12
CASP4P49662 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 AC021723.1-201ENST00000486306 515 ntBASIC15.8■□□□□ 0.12
CASP4P49662 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 SCARNA21-201ENST00000517026 139 ntBASIC15.8■□□□□ 0.12
CASP4P49662 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP4P49662 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 AC005324.6-201ENST00000587972 613 ntBASIC15.8■□□□□ 0.12
CASP4P49662 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.8■□□□□ 0.12
CASP4P49662 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP4P49662 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP4P49662 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP4P49662 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASP4P49662 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.79■□□□□ 0.12
CASP4P49662 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASP4P49662 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASP4P49662 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms