Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 KRT8P4-201ENST00000509735 1454 ntBASIC15.21■□□□□ 0.03
SLC1A1P43005 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A1P43005 CU639417.3-201ENST00000624240 1404 ntBASIC15.21■□□□□ 0.03
SLC1A1P43005 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A1P43005 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A1P43005 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SLC1A1P43005 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A1P43005 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A1P43005 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A1P43005 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A1P43005 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.21■□□□□ 0.02
SLC1A1P43005 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC1A1P43005 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
SLC1A1P43005 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A1P43005 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A1P43005 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 AC073548.1-201ENST00000624088 1882 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 AC005252.3-201ENST00000623855 2258 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A1P43005 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A1P43005 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A1P43005 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A1P43005 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A1P43005 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 MIR326-201ENST00000362220 95 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 KRT43P-201ENST00000434019 910 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC1A1P43005 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A1P43005 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC1A1P43005 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A1P43005 AL596325.1-201ENST00000563991 1082 ntBASIC15.2■□□□□ 0.02
SLC1A1P43005 KRT18P8-201ENST00000581937 1246 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms