Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.63□□□□□ -0.07
LTBRP36941 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
LTBRP36941 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 DOC2GP-204ENST00000639052 2548 ntBASIC14.62□□□□□ -0.07
LTBRP36941 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LTBRP36941 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 GGTLC4P-201ENST00000402176 664 ntBASIC14.62□□□□□ -0.07
LTBRP36941 AC103563.1-201ENST00000429316 123 ntBASIC14.62□□□□□ -0.07
LTBRP36941 AC092810.2-201ENST00000431570 362 ntBASIC14.62□□□□□ -0.07
LTBRP36941 KRT19P4-201ENST00000443208 943 ntBASIC14.62□□□□□ -0.07
LTBRP36941 CDK4P1-201ENST00000454213 828 ntBASIC14.62□□□□□ -0.07
LTBRP36941 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.62□□□□□ -0.07
LTBRP36941 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 DPY19L2P4-201ENST00000479881 442 ntBASIC14.62□□□□□ -0.07
LTBRP36941 TBC1D3P6-201ENST00000505954 962 ntBASIC14.62□□□□□ -0.07
LTBRP36941 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 MBP-230ENST00000528160 584 ntTSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 AL353622.2-201ENST00000605846 425 ntBASIC14.62□□□□□ -0.07
LTBRP36941 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LTBRP36941 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LTBRP36941 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.62□□□□□ -0.07
LTBRP36941 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.61□□□□□ -0.07
LTBRP36941 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 AC092115.1-201ENST00000566277 1402 ntBASIC14.61□□□□□ -0.07
LTBRP36941 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.61□□□□□ -0.07
LTBRP36941 AL136084.1-201ENST00000449172 318 ntBASIC14.61□□□□□ -0.07
LTBRP36941 RN7SL846P-201ENST00000467429 292 ntBASIC14.61□□□□□ -0.07
LTBRP36941 AC108724.1-201ENST00000481669 352 ntBASIC14.61□□□□□ -0.07
LTBRP36941 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC14.61□□□□□ -0.07
LTBRP36941 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.61□□□□□ -0.07
LTBRP36941 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 KRT8P34-201ENST00000577607 1044 ntBASIC14.61□□□□□ -0.07
LTBRP36941 RN7SL524P-201ENST00000581152 300 ntBASIC14.61□□□□□ -0.07
LTBRP36941 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.61□□□□□ -0.07
LTBRP36941 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.61□□□□□ -0.07
LTBRP36941 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LTBRP36941 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 SALL4P6-201ENST00000429385 1691 ntBASIC14.61□□□□□ -0.07
LTBRP36941 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.61□□□□□ -0.07
LTBRP36941 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LTBRP36941 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LTBRP36941 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LTBRP36941 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LTBRP36941 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LTBRP36941 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LTBRP36941 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms