Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN3P26045 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.81□□□□□ -0.04
PTPN3P26045 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 IGHV3-71-201ENST00000523324 359 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN3P26045 RBM8B-201ENST00000555532 525 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
PTPN3P26045 AC100827.2-201ENST00000563214 1194 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN3P26045 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.81□□□□□ -0.04
PTPN3P26045 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.81□□□□□ -0.04
PTPN3P26045 MIR6805-201ENST00000615055 62 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 AC009542.2-202ENST00000619004 1067 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PTPN3P26045 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTPN3P26045 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTPN3P26045 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTPN3P26045 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTPN3P26045 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PTPN3P26045 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN3P26045 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.81□□□□□ -0.04
PTPN3P26045 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTPN3P26045 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 MIR658-201ENST00000385210 100 ntBASIC14.8□□□□□ -0.04
PTPN3P26045 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 ST13P19-201ENST00000442505 1124 ntBASIC14.8□□□□□ -0.04
PTPN3P26045 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.8□□□□□ -0.04
PTPN3P26045 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.8□□□□□ -0.04
PTPN3P26045 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PTPN3P26045 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
PTPN3P26045 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AC015818.8-201ENST00000587907 1519 ntBASIC14.8□□□□□ -0.04
PTPN3P26045 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN3P26045 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN3P26045 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN3P26045 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms