Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.67□□□□□ -0.22
CHMP24386 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.67□□□□□ -0.22
CHMP24386 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.67□□□□□ -0.22
CHMP24386 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 YBX1P6-201ENST00000442962 1002 ntBASIC13.67□□□□□ -0.22
CHMP24386 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.67□□□□□ -0.22
CHMP24386 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.67□□□□□ -0.22
CHMP24386 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.67□□□□□ -0.22
CHMP24386 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 AC008687.7-202ENST00000637404 953 ntBASIC13.67□□□□□ -0.22
CHMP24386 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CHMP24386 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.67□□□□□ -0.22
CHMP24386 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHMP24386 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 TCAM1P-207ENST00000485295 1537 ntBASIC13.66□□□□□ -0.22
CHMP24386 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 AC099336.1-201ENST00000417053 1171 ntBASIC13.66□□□□□ -0.22
CHMP24386 HLA-V-201ENST00000429037 534 ntBASIC13.66□□□□□ -0.22
CHMP24386 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.66□□□□□ -0.22
CHMP24386 AC078819.1-201ENST00000547454 765 ntBASIC13.66□□□□□ -0.22
CHMP24386 AC012085.1-201ENST00000548270 765 ntBASIC13.66□□□□□ -0.22
CHMP24386 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CHMP24386 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 PPT1-213ENST00000641319 2388 ntBASIC13.66□□□□□ -0.22
CHMP24386 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.66□□□□□ -0.22
CHMP24386 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHMP24386 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.66□□□□□ -0.22
CHMP24386 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 AHCYP2-201ENST00000430630 1300 ntBASIC13.65□□□□□ -0.22
CHMP24386 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms