Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB4AP20338 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB4AP20338 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB4AP20338 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RAB4AP20338 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RAB4AP20338 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB4AP20338 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RAB4AP20338 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB4AP20338 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
RAB4AP20338 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
RAB4AP20338 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.21□□□□□ -0.61
RAB4AP20338 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
RAB4AP20338 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.21□□□□□ -0.61
RAB4AP20338 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
RAB4AP20338 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
RAB4AP20338 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.21□□□□□ -0.61
RAB4AP20338 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.21□□□□□ -0.61
RAB4AP20338 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 LINC00638-201ENST00000555578 2518 ntBASIC11.21□□□□□ -0.61
RAB4AP20338 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RAB4AP20338 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.21□□□□□ -0.61
RAB4AP20338 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
RAB4AP20338 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.21□□□□□ -0.62
RAB4AP20338 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.21□□□□□ -0.62
RAB4AP20338 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.21□□□□□ -0.62
RAB4AP20338 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.21□□□□□ -0.62
RAB4AP20338 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RAB4AP20338 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 AC241952.1-201ENST00000612480 6897 ntBASIC11.21□□□□□ -0.62
RAB4AP20338 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
RAB4AP20338 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
RAB4AP20338 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 INE2-201ENST00000630399 1874 ntBASIC11.21□□□□□ -0.62
RAB4AP20338 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RAB4AP20338 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RAB4AP20338 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 POM121L14P-201ENST00000406100 1558 ntBASIC11.2□□□□□ -0.62
RAB4AP20338 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms