Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
ATF1P18846 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 MRPL37P1-201ENST00000592451 1337 ntBASIC12.82□□□□□ -0.36
ATF1P18846 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 AC138969.2-201ENST00000532739 9932 ntBASIC12.82□□□□□ -0.36
ATF1P18846 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.82□□□□□ -0.36
ATF1P18846 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 AL391825.1-201ENST00000457671 1364 ntBASIC12.81□□□□□ -0.36
ATF1P18846 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 ACKR1-201ENST00000368121 1240 ntBASIC12.81□□□□□ -0.36
ATF1P18846 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 AC087499.6-201ENST00000411576 835 ntBASIC12.81□□□□□ -0.36
ATF1P18846 SPTLC1P1-201ENST00000447199 261 ntBASIC12.81□□□□□ -0.36
ATF1P18846 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 KRT18P25-201ENST00000508931 1278 ntBASIC12.81□□□□□ -0.36
ATF1P18846 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ATF1P18846 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 RFPL4AP1-201ENST00000530883 850 ntBASIC12.81□□□□□ -0.36
ATF1P18846 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 AC138761.1-201ENST00000584393 385 ntBASIC12.81□□□□□ -0.36
ATF1P18846 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
ATF1P18846 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.81□□□□□ -0.36
ATF1P18846 AC005252.2-201ENST00000624630 1141 ntBASIC12.81□□□□□ -0.36
ATF1P18846 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATF1P18846 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATF1P18846 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATF1P18846 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.8□□□□□ -0.36
ATF1P18846 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
ATF1P18846 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ATF1P18846 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms