Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 AP000593.2-201ENST00000542775 1433 ntBASIC14.72□□□□□ -0.05
VCLP18206 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
VCLP18206 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VCLP18206 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
VCLP18206 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 AL136309.1-201ENST00000403917 691 ntBASIC14.71□□□□□ -0.05
VCLP18206 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
VCLP18206 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CNN2P10-201ENST00000443067 918 ntBASIC14.71□□□□□ -0.05
VCLP18206 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 AL391280.1-201ENST00000506969 1062 ntBASIC14.71□□□□□ -0.05
VCLP18206 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 AC004466.1-201ENST00000599515 1080 ntBASIC14.71□□□□□ -0.05
VCLP18206 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VCLP18206 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VCLP18206 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VCLP18206 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.71□□□□□ -0.05
VCLP18206 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.71□□□□□ -0.06
VCLP18206 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.71□□□□□ -0.06
VCLP18206 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VCLP18206 SALL4P5-201ENST00000419001 1760 ntBASIC14.7□□□□□ -0.06
VCLP18206 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.7□□□□□ -0.06
VCLP18206 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.7□□□□□ -0.06
VCLP18206 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.7□□□□□ -0.06
VCLP18206 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VCLP18206 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 BRWD1P1-201ENST00000401091 371 ntBASIC14.7□□□□□ -0.06
VCLP18206 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.7□□□□□ -0.06
VCLP18206 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.7□□□□□ -0.06
VCLP18206 Z93015.1-201ENST00000451718 390 ntBASIC14.7□□□□□ -0.06
VCLP18206 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VCLP18206 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VCLP18206 AL583810.1-201ENST00000553344 1045 ntBASIC14.7□□□□□ -0.06
VCLP18206 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.7□□□□□ -0.06
VCLP18206 RN7SL560P-201ENST00000577943 264 ntBASIC14.7□□□□□ -0.06
VCLP18206 PPY2P-201ENST00000582808 702 ntBASIC14.7□□□□□ -0.06
VCLP18206 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 EEF1DP1-201ENST00000585891 896 ntBASIC14.7□□□□□ -0.06
VCLP18206 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.7□□□□□ -0.06
VCLP18206 AC138696.2-201ENST00000607376 223 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms