Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.56■□□□□ 0.08
SYN1P17600 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC15.56■□□□□ 0.08
SYN1P17600 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.56■□□□□ 0.08
SYN1P17600 PSME2-218ENST00000630027 185 ntTSL 3 BASIC15.56■□□□□ 0.08
SYN1P17600 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SYN1P17600 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.56■□□□□ 0.08
SYN1P17600 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 CICP23-201ENST00000605013 2741 ntBASIC15.56■□□□□ 0.08
SYN1P17600 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYN1P17600 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.56■□□□□ 0.08
SYN1P17600 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SYN1P17600 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SYN1P17600 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.55■□□□□ 0.08
SYN1P17600 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 AC147876.1-201ENST00000504408 322 ntBASIC15.55■□□□□ 0.08
SYN1P17600 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.55■□□□□ 0.08
SYN1P17600 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.55■□□□□ 0.08
SYN1P17600 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.55■□□□□ 0.08
SYN1P17600 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.55■□□□□ 0.08
SYN1P17600 AC079414.2-201ENST00000567157 1104 ntBASIC15.55■□□□□ 0.08
SYN1P17600 AC084262.1-201ENST00000567818 751 ntBASIC15.55■□□□□ 0.08
SYN1P17600 RN7SL524P-201ENST00000581152 300 ntBASIC15.55■□□□□ 0.08
SYN1P17600 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 AL450487.2-201ENST00000615934 407 ntBASIC15.55■□□□□ 0.08
SYN1P17600 AC073869.4-201ENST00000620841 800 ntBASIC15.55■□□□□ 0.08
SYN1P17600 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.55■□□□□ 0.08
SYN1P17600 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYN1P17600 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.55■□□□□ 0.08
SYN1P17600 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SYN1P17600 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.54■□□□□ 0.08
SYN1P17600 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.54■□□□□ 0.08
SYN1P17600 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
SYN1P17600 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.54■□□□□ 0.08
SYN1P17600 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYN1P17600 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.54■□□□□ 0.08
SYN1P17600 PDXDC2P-206ENST00000534700 1315 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms