Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL11A1P12107 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COL11A1P12107 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 FMO6P-201ENST00000236166 1620 ntBASIC16.05■□□□□ 0.16
COL11A1P12107 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
COL11A1P12107 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 EEF1GP8-201ENST00000506566 1154 ntBASIC16.05■□□□□ 0.16
COL11A1P12107 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.05■□□□□ 0.16
COL11A1P12107 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 AC023968.2-201ENST00000560593 1049 ntBASIC16.05■□□□□ 0.16
COL11A1P12107 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.05■□□□□ 0.16
COL11A1P12107 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.05■□□□□ 0.16
COL11A1P12107 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.05■□□□□ 0.16
COL11A1P12107 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.05■□□□□ 0.16
COL11A1P12107 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.05■□□□□ 0.16
COL11A1P12107 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL11A1P12107 TBC1D27-202ENST00000424239 1573 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
COL11A1P12107 ABCD1P4-201ENST00000399687 604 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 RN7SL351P-201ENST00000469306 248 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 AC093300.1-201ENST00000510368 1201 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.04■□□□□ 0.16
COL11A1P12107 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.04■□□□□ 0.16
COL11A1P12107 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.04■□□□□ 0.16
COL11A1P12107 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.04■□□□□ 0.16
COL11A1P12107 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.04■□□□□ 0.16
COL11A1P12107 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
COL11A1P12107 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.04■□□□□ 0.16
COL11A1P12107 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL11A1P12107 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 AL590824.1-201ENST00000403828 1349 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 AC234644.1-201ENST00000406065 370 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.03■□□□□ 0.16
COL11A1P12107 DNM1P51-201ENST00000558149 522 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 MIR4265-201ENST00000582152 99 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms