Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC093826.1-201ENST00000508655 993 ntBASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 KRT8P2-201ENST00000556193 944 ntBASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CSB-PGBD3P0DP91 AC126755.1-201ENST00000525846 6405 ntBASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 AL161772.1-201ENST00000610494 4412 ntBASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 RNVU1-8-201ENST00000364272 125 ntBASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 RN7SL767P-201ENST00000493013 295 ntBASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 AP005212.2-201ENST00000584979 510 ntBASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSB-PGBD3P0DP91 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AL135901.1-201ENST00000451812 333 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 GRPEL2P1-201ENST00000453145 339 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AC244197.1-201ENST00000456494 951 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 GOLGA2P7-209ENST00000560408 745 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 AC010632.2-201ENST00000588369 1224 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 MIR6746-201ENST00000620971 63 ntBASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.02■□□□□ 0.64
CSB-PGBD3P0DP91 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CSB-PGBD3P0DP91 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms