Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 AP002414.2-201ENST00000591780 3365 ntBASIC17.03■□□□□ 0.32
HLA-DOAP06340 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC144831.1-201ENST00000573312 2656 ntBASIC17.02■□□□□ 0.32
HLA-DOAP06340 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC079112.1-201ENST00000454972 939 ntBASIC17.02■□□□□ 0.32
HLA-DOAP06340 ALG1L13P-202ENST00000519320 584 ntBASIC17.02■□□□□ 0.32
HLA-DOAP06340 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 AC104506.1-201ENST00000609247 429 ntBASIC17.02■□□□□ 0.32
HLA-DOAP06340 YRDCP1-201ENST00000621419 643 ntBASIC17.02■□□□□ 0.32
HLA-DOAP06340 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOAP06340 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DOAP06340 BRD7P5-201ENST00000299197 1822 ntBASIC17.02■□□□□ 0.31
HLA-DOAP06340 AC023824.1-201ENST00000562945 2975 ntBASIC17.02■□□□□ 0.31
HLA-DOAP06340 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DOAP06340 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOAP06340 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOAP06340 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
HLA-DOAP06340 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DOAP06340 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DOAP06340 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOAP06340 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AC253536.4-201ENST00000440539 267 ntBASIC17.01■□□□□ 0.31
HLA-DOAP06340 RPL7P35-201ENST00000446943 740 ntBASIC17.01■□□□□ 0.31
HLA-DOAP06340 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 LDHBP1-201ENST00000455730 1119 ntBASIC17.01■□□□□ 0.31
HLA-DOAP06340 TPT1P11-201ENST00000458482 498 ntBASIC17.01■□□□□ 0.31
HLA-DOAP06340 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 NPM1P43-201ENST00000558669 786 ntBASIC17.01■□□□□ 0.31
HLA-DOAP06340 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DOAP06340 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOAP06340 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms