Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MT-ND1P03886 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MT-ND1P03886 AGAP12P-201ENST00000585227 2359 ntBASIC13.79□□□□□ -0.2
MT-ND1P03886 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MT-ND1P03886 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MT-ND1P03886 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MT-ND1P03886 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.78□□□□□ -0.2
MT-ND1P03886 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.78□□□□□ -0.2
MT-ND1P03886 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.78□□□□□ -0.2
MT-ND1P03886 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 MRPS18AP1-201ENST00000414458 589 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 NUS1P3-201ENST00000423502 862 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 AC007969.1-201ENST00000433675 447 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.78□□□□□ -0.2
MT-ND1P03886 RRP7BP-205ENST00000566851 833 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 AC138761.1-201ENST00000584393 385 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
MT-ND1P03886 AL390955.2-201ENST00000603032 514 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 AC093813.1-201ENST00000605066 256 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 AL662799.1-202ENST00000614205 422 ntBASIC13.78□□□□□ -0.2
MT-ND1P03886 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.78□□□□□ -0.2
MT-ND1P03886 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MT-ND1P03886 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MT-ND1P03886 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.78□□□□□ -0.2
MT-ND1P03886 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
MT-ND1P03886 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
MT-ND1P03886 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
MT-ND1P03886 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MT-ND1P03886 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.77□□□□□ -0.2
MT-ND1P03886 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MT-ND1P03886 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.77□□□□□ -0.21
MT-ND1P03886 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.77□□□□□ -0.21
MT-ND1P03886 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.77□□□□□ -0.21
MT-ND1P03886 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms