Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 LINC00431-202ENST00000636375 159 ntBASIC15.64■□□□□ 0.09
CHRNA1P02708 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA1P02708 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 LINC00115-201ENST00000473798 1317 ntBASIC15.64■□□□□ 0.09
CHRNA1P02708 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA1P02708 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA1P02708 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA1P02708 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA1P02708 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC098934.1-203ENST00000442868 1262 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC084752.1-201ENST00000509766 622 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 AC005740.1-201ENST00000515639 522 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CHRNA1P02708 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.63■□□□□ 0.09
CHRNA1P02708 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.63■□□□□ 0.09
CHRNA1P02708 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.63■□□□□ 0.09
CHRNA1P02708 MIR6074-201ENST00000612054 107 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC138466.5-201ENST00000624002 808 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.63■□□□□ 0.09
CHRNA1P02708 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC099063.4-201ENST00000641099 1602 ntBASIC15.63■□□□□ 0.09
CHRNA1P02708 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.63■□□□□ 0.09
CHRNA1P02708 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA1P02708 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA1P02708 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CHRNA1P02708 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHRNA1P02708 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 AC006987.1-201ENST00000413610 527 ntBASIC15.62■□□□□ 0.09
CHRNA1P02708 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.62■□□□□ 0.09
CHRNA1P02708 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 AC026410.1-201ENST00000507366 1101 ntBASIC15.62■□□□□ 0.09
CHRNA1P02708 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.62■□□□□ 0.09
CHRNA1P02708 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CHRNA1P02708 MIR6756-201ENST00000616240 63 ntBASIC15.62■□□□□ 0.09
CHRNA1P02708 FGD5P1-202ENST00000614866 2498 ntBASIC15.62■□□□□ 0.09
CHRNA1P02708 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRNA1P02708 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHRNA1P02708 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms