Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 DPY19L2P5-201ENST00000456300 331 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.83■□□□□ 0.44
CACNA1FO60840 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1FO60840 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1FO60840 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1FO60840 AL031713.1-201ENST00000564813 661 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.83■□□□□ 0.44
CACNA1FO60840 AC087392.5-201ENST00000612517 489 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 AC103691.2-201ENST00000618824 433 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CACNA1FO60840 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.83■□□□□ 0.44
CACNA1FO60840 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CACNA1FO60840 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CACNA1FO60840 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.83■□□□□ 0.44
CACNA1FO60840 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 AC008620.2-201ENST00000510294 1569 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 AL157996.1-201ENST00000624684 2299 ntBASIC17.83■□□□□ 0.44
CACNA1FO60840 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1FO60840 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CACNA1FO60840 HIST2H2BA-201ENST00000412169 381 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 AC073210.1-201ENST00000414799 232 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 AC069218.1-201ENST00000435269 762 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 AC098935.1-201ENST00000446057 611 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 AC006529.1-201ENST00000459978 637 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 RN7SL564P-201ENST00000496309 250 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 DNM1P30-201ENST00000563586 452 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1FO60840 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1FO60840 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 RPSAP31-201ENST00000416648 895 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1FO60840 NPM1P43-201ENST00000558669 786 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 AP005264.5-201ENST00000590066 467 ntBASIC17.82■□□□□ 0.44
CACNA1FO60840 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.82■□□□□ 0.44
CACNA1FO60840 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1FO60840 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CACNA1FO60840 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1FO60840 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1FO60840 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CACNA1FO60840 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CACNA1FO60840 Z98885.3-201ENST00000624882 1757 ntBASIC17.81■□□□□ 0.44
CACNA1FO60840 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CACNA1FO60840 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1FO60840 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1FO60840 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.81■□□□□ 0.44
CACNA1FO60840 GUSBP10-201ENST00000417412 665 ntBASIC17.81■□□□□ 0.44
CACNA1FO60840 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.81■□□□□ 0.44
CACNA1FO60840 AP002803.1-201ENST00000528836 498 ntBASIC17.81■□□□□ 0.44
CACNA1FO60840 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CACNA1FO60840 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms