Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.02□□□□□ -0.33
CYTIPO60759 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.02□□□□□ -0.33
CYTIPO60759 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CYTIPO60759 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.02□□□□□ -0.33
CYTIPO60759 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 AC144522.1-201ENST00000625111 1658 ntBASIC13.02□□□□□ -0.33
CYTIPO60759 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYTIPO60759 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.02□□□□□ -0.33
CYTIPO60759 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CYTIPO60759 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.02□□□□□ -0.33
CYTIPO60759 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 MBLAC2-202ENST00000514906 1936 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 AC007191.1-201ENST00000623179 2995 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 AC091804.1-201ENST00000486888 567 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 AC006122.1-201ENST00000493323 440 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 HLA-J-204ENST00000495278 958 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 AC005740.2-201ENST00000511085 419 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 MIR4525-201ENST00000580000 75 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.01□□□□□ -0.33
CYTIPO60759 AC008805.1-201ENST00000590892 364 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 AC133540.1-201ENST00000620845 1019 ntBASIC13.01□□□□□ -0.33
CYTIPO60759 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.01□□□□□ -0.33
CYTIPO60759 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYTIPO60759 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.01□□□□□ -0.33
CYTIPO60759 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CYTIPO60759 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13□□□□□ -0.33
CYTIPO60759 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13□□□□□ -0.33
CYTIPO60759 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CYTIPO60759 AC005252.3-201ENST00000623855 2258 ntBASIC13□□□□□ -0.33
CYTIPO60759 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CYTIPO60759 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CYTIPO60759 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms