Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC28A1O00337 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC28A1O00337 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SLC28A1O00337 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 AC015936.2-201ENST00000593177 259 ntBASIC14.03□□□□□ -0.16
SLC28A1O00337 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SLC28A1O00337 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC28A1O00337 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC28A1O00337 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SLC28A1O00337 AC111170.3-201ENST00000624282 2464 ntBASIC14.02□□□□□ -0.16
SLC28A1O00337 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC28A1O00337 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SLC28A1O00337 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC28A1O00337 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC28A1O00337 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC28A1O00337 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC28A1O00337 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC28A1O00337 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC28A1O00337 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC28A1O00337 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SLC28A1O00337 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 AC092933.1-201ENST00000393644 945 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC28A1O00337 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.02□□□□□ -0.17
SLC28A1O00337 RN7SL752P-201ENST00000463779 287 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC28A1O00337 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 AP003171.2-201ENST00000528208 925 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 SLC25A47P1-201ENST00000531577 414 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC28A1O00337 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC28A1O00337 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC28A1O00337 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC28A1O00337 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC28A1O00337 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC28A1O00337 MIR4683-201ENST00000579659 81 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.02□□□□□ -0.17
SLC28A1O00337 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SLC28A1O00337 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SLC28A1O00337 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
SLC28A1O00337 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 AL022313.4-201ENST00000562756 2046 ntBASIC14.02□□□□□ -0.17
SLC28A1O00337 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC28A1O00337 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC28A1O00337 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC28A1O00337 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC28A1O00337 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC28A1O00337 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC28A1O00337 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC28A1O00337 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC28A1O00337 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC28A1O00337 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms