Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 CICP12-201ENST00000455801 843 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 NUP210P1-202ENST00000504322 710 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 AC024681.1-201ENST00000521917 487 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 SNORD3B-2-202ENST00000571722 791 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 AC016629.1-201ENST00000596579 586 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 MIR6720-201ENST00000611664 98 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 MRPL37P1-201ENST00000592451 1337 ntBASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA3F8WFD2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 AC136759.1-202ENST00000530858 2194 ntBASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NPIPA3F8WFD2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 RN7SKP214-201ENST00000364208 315 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 RCC2P8-201ENST00000502779 1035 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 ALG3P1-201ENST00000508806 1114 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 GCOM2-201ENST00000509133 1104 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 SCARNA21-201ENST00000517026 139 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC090857.1-201ENST00000527400 390 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC131206.1-201ENST00000538078 1211 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AL160314.3-201ENST00000556041 767 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 BX088702.1-201ENST00000610784 235 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC015967.2-201ENST00000624092 234 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC006435.4-201ENST00000625037 234 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AL356737.1-201ENST00000634391 234 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 NAP1L6-202ENST00000641404 1222 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms