Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 KRT8P43-201ENST00000406052 1458 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 LINC00115-201ENST00000473798 1317 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 AC092115.1-201ENST00000566277 1402 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 SNORD88B-201ENST00000408454 91 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MIR1226-201ENST00000408658 75 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 YY1P2-201ENST00000438766 948 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 PSME2P2-201ENST00000453033 700 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 VDAC1P11-201ENST00000458323 852 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 AC093700.1-201ENST00000503348 717 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 DERL2-206ENST00000572834 589 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 RN7SL455P-201ENST00000580629 282 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MIR5193-201ENST00000584510 109 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 KF455155.1-201ENST00000604493 303 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MEP1AP1-201ENST00000636082 1097 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 MROH4P-201ENST00000431302 1578 ntBASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM88BA6NKF7 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.46■□□□□ 0.22
TMEM88BA6NKF7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM88BA6NKF7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
TMEM88BA6NKF7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AC010086.2-201ENST00000428616 226 ntBASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AF186996.6-201ENST00000485294 149 ntBASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms