Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCCD1A6NED2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.48■□□□□ 0.07
RCCD1A6NED2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 HMGN1P19-201ENST00000436976 333 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC012441.1-201ENST00000446669 685 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC011495.1-201ENST00000498085 584 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 RN7SL48P-201ENST00000579283 293 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 BEND3P3-201ENST00000611030 2440 ntBASIC15.47■□□□□ 0.07
RCCD1A6NED2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCCD1A6NED2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.47■□□□□ 0.07
RCCD1A6NED2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 AC022494.1-201ENST00000466044 728 ntBASIC15.46■□□□□ 0.07
RCCD1A6NED2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 AC009486.1-201ENST00000569860 813 ntBASIC15.46■□□□□ 0.07
RCCD1A6NED2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCCD1A6NED2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms