Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 MBLAC2-202ENST00000514906 1936 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 RPL17P11-201ENST00000417593 544 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AL160314.3-201ENST00000556041 767 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AC008805.1-201ENST00000590892 364 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 BNIP3P13-201ENST00000599968 566 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 AC022748.3-201ENST00000621828 275 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC012617.1-204ENST00000586340 2305 ntBASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC004899.1-201ENST00000424687 1714 ntBASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC144522.1-201ENST00000625111 1658 ntBASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AL355334.1-201ENST00000417713 215 ntBASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC005586.2-201ENST00000563946 837 ntBASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI2Q9Y5P3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms