Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 FAM197Y3-203ENST00000618346 717 ntBASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 KRT8P35-201ENST00000483942 1338 ntBASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 MKRN5P-201ENST00000445263 1467 ntBASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 AL158070.2-201ENST00000623713 1621 ntBASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AC110048.1-201ENST00000604293 2157 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AC011498.7-201ENST00000624986 2027 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AC140113.2-201ENST00000604370 208 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AGAP10P-201ENST00000454844 2418 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 NCLP1-201ENST00000445357 1963 ntBASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ERGIC3Q9Y282 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.33□□□□□ -0.27
ERGIC3Q9Y282 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 AC012531.1-201ENST00000562848 2680 ntBASIC13.33□□□□□ -0.28
ERGIC3Q9Y282 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms