Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZC3H4Q9UPT8 AC009090.5-201ENST00000624886 2285 ntBASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC120057.1-201ENST00000483947 663 ntBASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 RN7SL375P-201ENST00000492442 298 ntBASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC087203.1-201ENST00000532111 1181 ntBASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZC3H4Q9UPT8 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AL008638.4-201ENST00000624792 1315 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AL080243.1-201ENST00000423293 1060 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AC104961.1-201ENST00000427605 771 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 RN7SL602P-201ENST00000578326 324 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 RN7SL718P-201ENST00000581254 303 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZC3H4Q9UPT8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 AC019109.1-201ENST00000401725 1874 ntBASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZC3H4Q9UPT8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ZC3H4Q9UPT8 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms