Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 GSTM2P1-201ENST00000405166 654 ntBASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AC067942.1-202ENST00000471756 1057 ntBASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 PEBP1P1-201ENST00000554856 510 ntBASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 MTHFD2P7-201ENST00000483867 983 ntBASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 AC137723.2-201ENST00000623540 398 ntBASIC21.88■■□□□ 1.09
RIMBP3Q9UFD9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 AP000343.1-201ENST00000440602 385 ntBASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 CXXC1P1-202ENST00000489409 1212 ntBASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 AC096713.1-201ENST00000514650 978 ntBASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 UBA3-212ENST00000630585 390 ntTSL 4 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.87■■□□□ 1.09
RIMBP3Q9UFD9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 AC023024.2-201ENST00000623561 1993 ntBASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 MARCKSL1P2-201ENST00000401037 976 ntBASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIMBP3Q9UFD9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 AC022211.2-201ENST00000585075 2527 ntBASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 STK25-235ENST00000543554 2556 ntTSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 GH2-205ENST00000622506 702 ntTSL 5 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIMBP3Q9UFD9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms