Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ACTBP8-201ENST00000403258 1108 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 BAATP1-201ENST00000412284 1225 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 FAM21FP-201ENST00000426241 1131 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 FTH1P14-201ENST00000482930 551 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 AP001582.1-201ENST00000525856 295 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 AC009486.1-201ENST00000569860 813 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 BX088702.1-201ENST00000610784 235 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 AP005019.2-201ENST00000615104 511 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 AC005252.2-201ENST00000624630 1141 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 AC134312.5-201ENST00000568031 1313 ntBASIC15.07■□□□□ 0
FOXP3Q9BZS1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
FOXP3Q9BZS1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FOXP3Q9BZS1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC092933.1-201ENST00000393644 945 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC093433.1-201ENST00000458048 571 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC106760.1-201ENST00000508690 800 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 ALG3P1-201ENST00000508806 1114 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AC015909.5-201ENST00000624336 2266 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PPT1-213ENST00000641319 2388 ntBASIC15.06■□□□□ 0
FOXP3Q9BZS1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FOXP3Q9BZS1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.06■□□□□ 0
FOXP3Q9BZS1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms